PrionScan specifications

Information


Unique identifier OMICS_05792
Name PrionScan
Restrictions to use None
Database management system MySQL
Community driven No
User data submission Not allowed
Maintained Yes

Maintainers


  • person_outline Vladimir Espinosa Angarica
  • person_outline Javier Sancho

Publication for PrionScan

PrionScan citation

library_books

The prion like RNA processing protein HNRPDL forms inherently toxic amyloid like inclusion bodies in bacteria

2015
Microb Cell Fact
PMCID: 4498515
PMID: 26160665
DOI: 10.1186/s12934-015-0284-7

[…] no acid compositional bias of Q/N enriched prion domains has allowed the recent development of three different algorithms to identify the presence of PrLDs in protein sequences: PAPA [], PLAAC [] and PrionScan []. No prionic propensity is predicted with any of these programs for the N-terminal segment, whereas all of them identify the C-terminal region as displaying a PrLD comprising residues 340– […]

PrionScan institution(s)
Departamento de Bioquímica y Biología Molecular y Celular, Facultad de Ciencias, Universidad de Zaragoza, Zaragoza, Spain; Institute for Biocomputation and Physics of Complex Systems (BIFI), Universidad de Zaragoza, Mariano Esquillor, Zaragoza, Spain; Joint Unit BIFI-IQFR (CSIC), Madrid, Spain; Institut de Biotecnologia i de Biomedicina, Universitat Autònoma de Barcelona, Bellaterra, Spain; Departament de Bioquimica i Biologia Molecular, Universitat Autònoma de Barcelona, Bellaterra, Spain
PrionScan funding source(s)
Supported by Banco Santander Central Hispano, Fundación Carolina and Universidad de Zaragoza, a doctoral fellowship awarded by Consejo Superior de Investigaciones Científicas, JAE program, grants BFU2010-14901 from Ministerio de Ciencia e Innovación (Spain) and 2009-SGR-760 from AGAUR (Generalitat de Catalunya), an ICREA Academia award (ICREA) and grants BFU2010-16297 [Ministerio de Ciencia e Innovación Spain] and PI078/08 and CTPR02/09 [DGA, Spain].

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