ProGENI specifications

Information


Unique identifier OMICS_20260
Name ProGENI
Alternative name Prioritization of Genes Enhanced with Network Information
Software type Application/Script
Interface Command line interface
Restrictions to use None
Input data A list of gene expressions.
Input format CSV
Operating system Unix/Linux
Programming languages Python
License MIT License
Computer skills Advanced
Stability Stable
Requirements Numpy, Scipy, Pandas, Sklearn
Maintained Yes

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Maintainers


  • person_outline Saurabh Sinha <>
  • person_outline Liewei Wang <>

ProGENI article

ProGENI institution(s)
Carl R. Woese Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, IL, USA; Department of Molecular Pharmacology and Experimental Therapeutics, Mayo Clinic Rochester, Rochester, MN, USA; Department of Health Sciences Research, Mayo Clinic, Rochester, MN, USA; Department of Computer Science and Institute of Genomic Biology, University of Illinois at Urbana-Champaign, Siebel Center, Urbana, IL, USA
ProGENI funding source(s)
Supported by grant 1U54GM114838 awarded by NIGMS through funds provided by the trans-NIH Big Data to Knowledge (BD2K) initiative.

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