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Privacy-preserving data exploration software tools | Genome-wide association analysis

Genome-wide association studies (GWAS) are a cornerstone of genotype–phenotype association in humans. These studies use various statistical tests to measure which polymorphisms in the genome are important for a given phenotype and which are…
DiffPriv
Desktop

DiffPriv

Calculates the neighbor distance. DiffPriv ensures the privacy of individuals…

Calculates the neighbor distance. DiffPriv ensures the privacy of individuals in both the case and control cohorts. It follows three steps: (1) stating the problem as an optimization problem; (2)…

PRINCESS
Desktop
HEALER
Desktop

HEALER

A framework to facilitate secure rare variants analysis with a small sample…

A framework to facilitate secure rare variants analysis with a small sample size. We target at the algorithm design aiming at reducing the computational and storage costs to learn a homomorphic exact…

PRESAGE
Desktop

PRESAGE PRivacy-preserving gEnetic testing via SoftwAre Guard Extension

Allows outsourcing genetic tests using Software Guard Extension (SGX). PRESAGE…

Allows outsourcing genetic tests using Software Guard Extension (SGX). PRESAGE supports genomic queries, which count genomic records by matching a set of biomarkers in the VCF files. It provides a…

dpTDT
Desktop

dpTDT

Aims to protect privacy in transmission disequilibrium test (TDT). dpTDT is a…

Aims to protect privacy in transmission disequilibrium test (TDT). dpTDT is a differentially private mechanism based on test statistics, p-values, and the shortest Hamming distance (SHD) scores. It…

SQC
Desktop

SQC Secure Quality Control

Enables checking the quality of data in a privacy-preserving way without…

Enables checking the quality of data in a privacy-preserving way without revealing sensitive information to a potential adversary. Secure Quality Control (SQC) employs state-of-the-art cryptographic…

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