Allows to facilitate genome based representation and analysis of proteomics data. proBAMsuite is a bioinformatics framework for proteomics and proteogenomics research. User can browse the cancer proteonomics datasets of interest. A central component is the protein BAM (proBAM) file format, and it also includes three R packages: pepXMLTab, proBAMr and proBAMtools. proBAMsuite enables easy adoption and use of the proBAM format for any proteomics laboratories.
Department of Biomedical Informatics, Department of Biochemistry, Department of Cancer Biology, Vanderbilt University, School of Medicine, Nashville, TN, USA; Jim Ayers Institute for Precancer Detection and Diagnosis, Vanderbilt-Ingram Cancer Center, Nashville, TN, USA
proBAMsuite funding source(s)
Supported by the National Institutes of Health grant U24CA159988.