ProCon specifications


Unique identifier OMICS_14061
Name ProCon
Alternative name PROteomics CONversion Tool
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Input data Proteomics data, LIMS database, spectral counts
Input format sequest.out, comet.out, ProteinScape® format, Proteome Discoverer® format
Output format mzIdentML, PRIDE XML, mzQuantML
Operating system Unix/Linux, Mac OS, Windows
Programming languages Java
Computer skills Medium
Version 0.9.646
Stability Stable
Maintained Yes



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  • person_outline Martin Eisenacher <>

Publication for PROteomics CONversion Tool

ProCon institution(s)
Medizinisches Proteom Center (MPC), Ruhr-Universität Bochum, Bochum, Germany; Kairos GmbH, Bochum, Germany; Leibniz-Institut für Analytische Wissenschaften, ISAS, Dortmund, Germany
ProCon funding source(s)
The development of ProCon was funded by the European Union projects ProDaC (EU FP6 grant LSHG-CT-2006-036814), ProteomeXchange (EU FP7 grant number 260558), the Deutsche Gesetzliche Unfallversicherung (DGUV) project DGUV-Lunge (617.0 FP 339A), P.U.R.E., a project of Nordrhein-Westfalen, a federal state of Germany, and the de.NBI project funded by the German Federal Ministry of Education and Research (BMBF), grant number FKZ 031 A 534A.

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