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Abraham Pedroza - NGS
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Abraham Pedroza

NGS
Secretaria de Salud • Instituto Nacional de Cancerolog√≠a • Tlalpan • Mexico

Skills and expertise

Fields of interest
  • WGS analysis
  • De novo sequencing analysis
  • aCGH data analysis
Languages
  • English
Programming languages
  • R

Fields of interest

WGS analysis
Evolves phenotypic models of cellular processes. phievo is an evolutionary…
Constructs short sequence read sets for thousands of spike-in variants that…
Recognizes cancer-related mutation clusters. DMCM is based on kernel density…
De novo sequencing analysis
Assists user in gene team problem. This algorithm has a time complexity…
Allows users to perform reference-assisted assembly or improve genome assembly…
Deduces ancestral characters on a rooted phylogenetic tree. PastML can…
aCGH data analysis
Consists of a Bayesian, unsupervised, integrative clustering model for…
Combines several steps for a high-quality probe and primer design for a variety…
Analyzes next-generation sequencing (NGS) from experiments using unique…