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Afagh Alavi - Dr.
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Afagh Alavi

Dr.
University of Tehran • Tehran • Iran

Skills and expertise

Fields of interest
  • WGS analysis
  • WES analysis
  • RNA-seq analysis
Languages
  • English

Fields of interest

WGS analysis
Supplies a protein homology search method alternative to BLAST. TOPAZ is a…
Enables users to fix drivers based on various mapping criteria and stringency.…
Intends to investigate collective functional impacts of differentially…
WES analysis
Investigates mutational signatures in cancer samples. MuSiCa includes options…
Enables large-scale metagenome and transcriptome reads clustering. SpaRC is an…
An indexing scheme to support sequence-based querying of terabyte-scale…
RNA-seq analysis
Offers an approach for quantifying transposable elements (TEs) from next…
Offers an approach dedicated to moonlighting long non-coding RNAs (mlncRNAs)…
Allows users to determine logistic regression bio-signatures. PReMS is a…