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Ahmed Fergala - Mr
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Ahmed Fergala

Mr
York University • Toronto • Canada

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • Metagenomic sequencing analysis
  • Gene expression array analysis
Languages
  • English

Fields of interest

RNA-seq analysis
Allows demultiplexing 5’-indexed reads. Axe matches the prefix of a sequence…
Facilitates phylostratigraphic analysis. phylostratr automates sequence…
Predicts transcriptomic structural variants (TSVs) from RNA-seq data. SQUID is…
Metagenomic sequencing analysis
Permits parallel, fine-grained pairwise alignment of metagenomes. IMSAME is a…
Permits exome, whole-genome, and targeted sequencing analyses. Mosdepth is a…
Consists of a codon-correct alignment and genome annotation tool. VIRULIGN…
Gene expression array analysis
Aims to characterize non-model organisms. IDP-denovo allows users to handle…
Gathers investigations of phytohormone responses. GSHR employs the integration…
Enables visualization and exploration of next-generation sequencing (NGS) data.…