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avilella - Bioinformatician • Doctorate/PhD
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avilella

Bioinformatician • Doctorate/PhD

Cambridge Epigenetix

Skills and expertise

Omics and technologies

  • WGS analysis
  • BS-seq analysis
  • DNA methylation array analysis

Programming languages

  • Perl
  • Python
  • R

Languages

  • English
  • Spanish

Favorites and Collections

Favorites

SAMtools
Desktop
MACS
Desktop
MEDIPS
Desktop
MEDME
Desktop
BWA
Desktop
FastQC
Desktop
Scramble
Desktop
Preseq
Desktop
Sambamba
Desktop
deepTools
Desktop
Web
Seqtk
Desktop
THOR
Desktop
MixChIP
Desktop
Bwa-meth
Desktop
QSEA
Desktop
Goleft
Desktop
fastp
Desktop

Collections

Reviews and Discussions

LATEST REVIEWS

iNPS 2017-10-09, 09:24:56
Promising software validated by 3rd party scientist but the website is down: http://www.picb.ac.cn/hanlab/ The cached version points to a page with the software to download, but link is also…
DANPOS 2017-10-05, 17:27:27
Easy to download and run. Minimal dependencies.

LATEST DISCUSSIONS

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Tools maintained

nucChIP

Desktop

nucChIP

(0) 0 discussion(s)
Uses the power of ChIP-seq protocols based on enzymatic digestion. nucChIP is a set of Python and R scripts designed to be easy to use by both computational and experimental biologists. Regular…