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Alejandro Lopez-Ceron - Student
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Alejandro Lopez-Ceron

Student
Colorado State University System • Colorado State University • Fort Collins • United States of America

Skills and expertise

Fields of interest
  • De novo sequencing analysis
  • RNA-seq analysis
  • Gene expression array analysis
Languages
  • English

Fields of interest

De novo sequencing analysis
Conducts RNA-seq read alignment and read counting from raw sequence reads to…
Examines epigenomic and transcriptomic next generation sequencing (NGS) data.…
Implements an indexing data structure for compacted de Bruijn graph (dBG) and…
RNA-seq analysis
Identifies potential long non-coding RNAs (lncRNA)-disease associations. TPGLDA…
Allows users to distinguish human and mouse reads in High-Throughput Sequencing…
Supports the validation of experiments by annotating variants and prioritizing…
Gene expression array analysis
Provides a collection of clustering similarity measures for all three…
Calculates average amino-acid identity (AAI) between a query proteome and all…
Consists of a dimension reduction technique designed for complex data sets with…