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Aleksandras Konovalovas - Bioinformatics
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Aleksandras Konovalovas

Bioinformatics
BlaZyme

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • BS-seq analysis
  • Gene expression array analysis
Languages
  • English

Fields of interest

RNA-seq analysis
Permits visual integration of KEGG pathway maps and expression profile data.…
Evaluates RNA-seq alignment results. RNAseqEval is a package that can be used…
Permits users to classify reads into barcode bins using the raw read signal.…
BS-seq analysis
Classifies protein sequence and identifies remote protein homology via…
Allows users to map long readings with high error rates. lordFAST is designed…
Calculates average amino-acid identity (AAI) between a query proteome and all…
Gene expression array analysis
Allows users to see expression profiles, to examine expression specificity,…
Enables adaptive correlation and covariance matrix shrinkage. CorShrink is a…
Enables the application of gene set tests (GST) in the absence of large parts…