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Alexandros Kanterakis - Workflow Development
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Alexandros Kanterakis

Workflow Development
Foundation for Research and Technology Hellas • Irákleion • Greece

Skills and expertise

Fields of interest
  • WGS analysis
  • RNA-seq analysis
  • Protein interaction analysis
Languages
  • English
Programming languages
  • Javascript
  • Python

TOOLS MAINTAINED

MOLGENIS-impute

Desktop

MOLGENIS-impute

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Gives priority to the ease of setting up, configuring and running an imputation. MOLGENIS-impute is an ‘imputation in a box’ solution that seamlessly and transparently automates the set up and…

Fields of interest

WGS analysis
Encodes string sequence into a mathematical representation. Nucl2Vec aims to…
Estimates species trees given a set of rooted gene trees. DynaDup is based on…
Estimates gene expression levels ab initio from sequences. ExPecto is based on…
RNA-seq analysis
Calculates average amino-acid identity (AAI) between a query proteome and all…
Models associated risk-dependence between long intergenic noncoding RNAs…
Creates gene networks for a target sample in both dense and sparse region.…
Protein interaction analysis
Furnishes a systematic rigid body docking algorithm. MAXDo is an approach…
Predicts RNA protein interaction via extreme gradient boosting classifier named…
Predicts protein-ligand absolute affinity based on 3D-convotional neural…