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Alexey Shavarda - Existential metabolomics
Open to new opportunities
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Open to new opportunities

Alexey Shavarda

Existential metabolomics
Department of Biological Sciences • Botanical Institute VL Komarova • Saint Petersburg • Russia

Skills and expertise

Fields of interest
  • MS-based untargeted proteomics
  • MS-based untargeted metabolomics
  • Protein interaction analysis
  • Russian
Programming languages
  • Delphi

Fields of interest

MS-based untargeted proteomics
Identifies chimeric (co-fragmented) peptide features that are common in complex…
Solves multiple peptide candidates that may match to a tandem mass spectrometry…
Supplies an algorithm for peak deconvolution for linear matrix-assisted laser…
MS-based untargeted metabolomics
Explains the activity of metabolic modules. Metabolizer takes into account the…
Offers a model investigating longitudinal and progressive dynamics of metabolic…
Automates the discovery of chemical organizations, and conducts a quantitative…
Protein interaction analysis
Assists in analyses of gene regulator. This package offers R modules to (i)…
Allows users to predict heme binding residues (HEMEs). For HEMEsPred, several…
Assesses the native-likeness of designed or predicted protein-ligand…