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Amanda Everitt - Bioinformatic Programmer II
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Amanda Everitt

Bioinformatic Programmer II
University of California System • University of California, San Francisco • San Francisco • United States of America

Skills and expertise

Fields of interest
  • WES analysis
  • ChIP-seq analysis
  • scRNA-seq analysis
Languages
  • English
Programming languages
  • Perl
  • Python
  • R
  • Shell (Bash)

Favorites and Collections

Favorites

zUMIs
Desktop
CEMiTool
Desktop

Collections

Fields of interest

WES analysis
Computes positively selected candidate variants for functional follow-up.…
Simplifies downstream utilization of high-throughput sequencing (HTS) data.…
Offers a solution for the management of bioinformatic experiments to study…
ChIP-seq analysis
Allows users to forecast footprints with a specific focus on ATAC-seq protocol.…
Maps bisulfite-treated short DNA reads to a reference genome. BisPin supports…
Aims to represent a family of aligned protein sequences or a collection of…
scRNA-seq analysis
Describes a platform for 3D in situ transcriptomics, enabled by DNA library…
Assists users in processing and similarity searching of next-generation…
Performs secure analyses and visualization of users’ private functional…