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Amit Chaudhary - NGS data Analysis
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Amit Chaudhary

NGS data Analysis
Motilal Nehru National Institute of Technology • Allahābād • India

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • Gene expression array analysis
  • Protein interaction analysis
Languages
  • English
Programming languages
  • C++
  • Perl
  • Python

Fields of interest

RNA-seq analysis
Allows to build a high-quality RNA-seq-based Gene Co-expression Network (GCN)…
Compresses coordinate sorted aligned SAM, BAM or CRAM files. Crumble is a…
Assists users in evaluating methods, particularly some data-driven methods or…
Gene expression array analysis
Enables evaluation, filtering, and analysis of gene models, as well as…
Allows users to see expression profiles, to examine expression specificity,…
Consists of a dimension reduction technique designed for complex data sets with…
Protein interaction analysis
Labels the donor/acceptor capacity of each atom and characterizes each H-bond…
Serves for predicting potential microbe-noninfectious disease associations…
Performs feature selection, model prediction, and missing data incorporation.…