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Amrita Bhattacherjee - Research Asscoiate, and Bioinformatician
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Amrita Bhattacherjee

Research Asscoiate, and Bioinformatician
Ministry of Science and Technology • Centre for DNA Fingerprinting and Diagnostics • Hyderabad • India

Skills and expertise

Fields of interest
  • WGS analysis
  • WES analysis
  • ChIP-seq analysis
Languages
  • English
Programming languages
  • Perl
  • R

Fields of interest

WGS analysis
Allows users to infer population structure. POPSTR is a Bayesian integrative…
Simulates genotypes for case-parent triads, case-control, and quantitative…
Classifies true and false variants. GARFIELD-NGS can be applied in single…
WES analysis
Clusters tumors based on the somatic mutation spectra of the putative cancer…
Suits for automated pipeline optimization. ToTem enables the integration of a…
Simplifies downstream utilization of high-throughput sequencing (HTS) data.…
ChIP-seq analysis
Assists users to observe the potential function of new genes according to those…
Compresses coordinate sorted aligned SAM, BAM or CRAM files. Crumble is a…
Predicts functions of no-knowledge proteins, particularly for those in the…