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Amy Cole - Postdoctoral Fellow
Open to new opportunities
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Open to new opportunities

Amy Cole

Postdoctoral Fellow
Trinity College Dublin • Dublin • Ireland

Skills and expertise

Fields of interest
  • WGS analysis
  • ChIP-seq analysis
  • aCGH data analysis
Languages
  • English
Programming languages
  • Perl
  • Python
  • R

Fields of interest

WGS analysis
Supplies a protein homology search method alternative to BLAST. TOPAZ is a…
Identifies and validates deletion structural variation (SV) in trios with whole…
Assists users for the reconstruction and analysis in the protein adaptation.…
ChIP-seq analysis
Annotates and filtrates variant files. VarAFT allows the comparison of several…
An indexing scheme to support sequence-based querying of terabyte-scale…
Incorporates tools and workflows for the analysis of environmental DNA (eDNA)…
aCGH data analysis
Enables spatial mapping of RNA-seq transcript data onto high resolution tissue…
Combines several steps for a high-quality probe and primer design for a variety…
Analyzes next-generation sequencing (NGS) from experiments using unique…