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Andrea Devecchi - Bioinformatician
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Andrea Devecchi

Bioinformatician
Istituti di Ricovero e Cura a Carattere Scientifico • Istituto Nazionale dei Tumori • Milan • Italy

Skills and expertise

Fields of interest
  • WES analysis
  • RNA-seq analysis
  • Metagenomic sequencing analysis
Languages
  • English
  • Italian
Programming languages
  • Perl
  • Python
  • R

Fields of interest

WES analysis
Provides a library written in Nim programming language that suits for simple…
Provides a tool to select the band width according to the read’s error rates.…
Identifies genotypic loci and covariates with effects on phenotypic variance.…
RNA-seq analysis
Provides a method for inferring transmission events. BadTrIP models evolution…
Allows clustering of large-scale networks. HipMCL is a distributed-memory…
Allows users to perform alternative splicing investigations. Matt provides more…
Metagenomic sequencing analysis
Determines underlying microbial community structures and associations between…
Allows microbial metataxonomic investigation. BTW is composed of a set of tools…
Compresses coordinate sorted aligned SAM, BAM or CRAM files. Crumble is a…