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Anna Katsiki - PhD candidate
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Anna Katsiki

PhD candidate
National and Kapodistrian University of Athens • Athens • Greece

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • Gene expression array analysis
  • Protein interaction analysis
Languages
  • English
Programming languages
  • C
  • Perl
  • R

Fields of interest

RNA-seq analysis
Allows users to map long readings with high error rates. lordFAST is designed…
Authorizes users to perform low-frequency variant calling. AIRVF is a…
Serves for distributed feature representation of splice junctions by embedding…
Gene expression array analysis
Consists of a genomic context explorer. GeneSpy is a program that aims to…
Allows to rank, filter and explore cancer genomics data (genes, cell lines and…
Reproduces Gaussian clusters. Clusterlab is a customizable package, able to…
Protein interaction analysis
Allows protein-protein interaction (PPI) interface prediction. PPIprediction is…
Enables network discovery from perturbed expression data. This approach…
Allows visualization and prediction of potential interaction regions at protein…