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Anne Dievart - Biologist-Bioinformatician
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Anne Dievart

Biologist-Bioinformatician
Centre de CoopĂ©ration Internationale en Recherche Agronomique pour le DĂ©veloppement • Paris • France

Skills and expertise

Fields of interest
  • WGS analysis
  • De novo sequencing analysis
  • Protein interaction analysis
Languages
  • English
Programming languages
  • Perl

TOOLS MAINTAINED

Phiv-Rootcell

Desktop

Phiv-Rootcell

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Allows users to quantify anatomical traits of rice roots transverse section images. Phiv-Rootcell serves for analyzing several root anatomical parameters based on images of rice root transverse…

Fields of interest

WGS analysis
Assists users in analyzing next-generation sequencing (NGS) data. snakePipes…
Enhances sequencing depth in low coverage areas with CIGAR string correction.…
Determines the percentage explained by variants and/or interactions of…
De novo sequencing analysis
Uses existing tools from the Galaxy ToolShed, as well as providing additional…
Formulates haplotype assembly as sparse tensor decomposition. AltHap is a…
Infers automatically single-copy marker genes. ezTree is a computational…
Protein interaction analysis
Provides an approach for the generation of ligand images filling protein…
Creates PyMOL hydrogen bonds (H-bonds) interaction views from Hbind tables.…
Permits multi-sample integration and processing of (1) known annotations from…