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Areejit Samal - Computational Systems Biologist
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Areejit Samal

Computational Systems Biologist
Institute of Mathematical Sciences • Chennai • India

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • Gene expression array analysis
  • Protein interaction analysis
Languages
  • English
Programming languages
  • C
  • C++
  • Python
  • R

TOOLS MAINTAINED

IMPPAT

Dataset

IMPPAT / Indian Medicinal Plants, Phytochemistry And Therapeutics

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Gathers information about traditional Indian medicine. IMPPAT is a manually curated database from scientific literature which aims to support in silico drug discovery. It assembles over 1700 Indian…

Fields of interest

RNA-seq analysis
Annotates and filtrates variant files. VarAFT allows the comparison of several…
Maps reads on a reference genome and then analyzes them. FaRLine employs a…
Recognizes spatiotemporal relationships in the human brain. brainImageR offers…
Gene expression array analysis
Allows users to compare genomic structures and annotations across multiple…
Determines the toxicity related end-points of nanoparticles (NPs). toxFlow is…
Enables to build custom genome browsers. GIVe is a programming library allowing…
Protein interaction analysis
Gathers a set of statistical functions dedicated to the evaluation of…
Creates gene networks for a target sample in both dense and sparse region.…
Consists of a predictor of DNA binding proteins. StackDPPred provides solutions…