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Francesca Arruga - Functional characterization of recurrently mutated genes in lymphoid diseases
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Francesca Arruga

Functional characterization of recurrently mutated genes in lymphoid diseases
Italian Institute for Genomic Medicine • Italy

Skills and expertise

Fields of interest
  • Genome edition
  • WES analysis
  • RNA-seq analysis
Languages
  • English
  • Italian

Fields of interest

Genome edition
Arranges single-nucleotide and amino acid variants genome-wide and measures…
Assesses deep-sequencing data from clustered regularly interspaced short…
Constructs optimal gRNAs for the CRISPR-Cpf1 system. CRISPR-DT can take into…
WES analysis
Provides an alignment-free single nucleotide polymorphism (SNP) genotyping…
Permits exome, whole-genome, and targeted sequencing analyses. Mosdepth is a…
Serves for cancer-related gene prioritization. MGOGP is an algorithm that can…
RNA-seq analysis
Calls peaks in ChIP-seq data with biological replicates. BinQuasi jointly…
Consists of a supervised learning approach to integrate expression quantitative…
Estimates gene expression levels ab initio from sequences. ExPecto is based on…