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Aude Darracq


Skills and expertise

Fields of interest
  • WGS analysis
  • De novo sequencing analysis
  • Metagenomic sequencing analysis
  • French
Programming languages
  • Python

Fields of interest

WGS analysis
Incorporates tools and workflows for the analysis of environmental DNA (eDNA)…
Describes how quantitative trait loci (QTLs) determine interspecies competition…
Allows to compress DNA sequences, quality scores and read identifiers. FaStore…
De novo sequencing analysis
Permits parallel, fine-grained pairwise alignment of metagenomes. IMSAME is a…
Studies dated genetic data allowing the determination of evolutionary rates and…
Estimates the ancestries and leverages them for their association with…
Metagenomic sequencing analysis
Facilitates phylostratigraphic analysis. phylostratr automates sequence…
Allows users to test multiple gene sets on a tree-transformed gene ontology…
Automatically combines transcriptomes from difference sources, such as assembly…