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Aurore Llinares

University of Clermont Auvergne • Clermont-Ferrand • France

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • Metagenomic sequencing analysis
  • Gene expression array analysis
  • English
  • French
  • Spanish
Programming languages
  • Java
  • Perl
  • PHP
  • Python
  • R
  • Shell (Bash)

Fields of interest

RNA-seq analysis
Serves for distributed feature representation of splice junctions by embedding…
Assists users in evaluating methods, particularly some data-driven methods or…
Permits the construction of tumor-cell specific gene/protein co-expression…
Metagenomic sequencing analysis
Serves as a fully automatic analysis of protein family conservation within a…
Serves for visual knowledge exploration in molecular interaction networks. This…
Serves as a dynamic alignment-free and reference-free read compression tool.…
Gene expression array analysis
Provides a visualization engine module. genomeview was developed for both…
Enables the application of gene set tests (GST) in the absence of large parts…
Identifies optimal number of clusters while partitioning data. Shrinkage…