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Ayan Malakar - Research Specialist I
Open to new opportunities
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Open to new opportunities

Ayan Malakar

Research Specialist I
University Of Tennessee System • University of Tennessee at Knoxville • Knoxville • United States of America

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • aCGH data analysis
  • Protein interaction analysis
Languages
  • English
Programming languages
  • Python
  • R
  • Shell (Bash)

Fields of interest

RNA-seq analysis
Assists users in investigating cancer metabolism when data on metabolic…
Allows to compress DNA sequences, quality scores and read identifiers. FaStore…
Allows users to return all read mappings within a given edit distance. FEM is…
aCGH data analysis
Permits user to work on segmentation of genomic and epigenomic profiles. iSeg…
Combines several steps for a high-quality probe and primer design for a variety…
Analyzes next-generation sequencing (NGS) from experiments using unique…
Protein interaction analysis
Permits to reconstruct transcriptional regulatory networks. TReNA uses gene…
Builds genome-minimized strains. MinGenome excludes metabolic and regulatory…
Provides a queryable global characterization of dynamics over large regions of…