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Aydan Karakaya - Master student
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Aydan Karakaya

Master student
University of Paris-Saclay • Gif-sur-Yvette • France

Skills and expertise

Fields of interest
  • Genome edition
  • Synthetic biology
  • Protein interaction analysis
Languages
  • English

Fields of interest

Genome edition
Assesses deep-sequencing data from clustered regularly interspaced short…
Creates single-guide RNA (sgRNA) for clustered regularly interspaced short…
Performs analysis, visualization and comparison of sequencing data from genome…
Synthetic biology
Allows modular assembly of Golden Gate-compatible cloning broad-host range…
Deduces the "lab-of-origin" of DNA sequence datasets. predict-lab-origin is an…
Enables synthetic gene designers to evaluate their own constructs and put codon…
Protein interaction analysis
Performs prediction of master regulators. TETRAMER is a Cytoscape App that (i)…
Serves for identifying regulons and validating gene regulatory networks.…
Predicts specific protein function via a model that utilizes protein network…