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Oksana Ayzsilnieks - Infectious diseases specialist
Open to new opportunities
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Open to new opportunities

Oksana Ayzsilnieks

Infectious diseases specialist
First Pavlov State Medical University of St. Peterburg • Saint Petersburg • Russia

Skills and expertise

Fields of interest
  • Genome edition
  • Immune system analysis
  • Gene expression array analysis
Languages
  • English
Programming languages
  • Python
  • R

Fields of interest

Genome edition
Arranges single-nucleotide and amino acid variants genome-wide and measures…
Creates single-guide RNA (sgRNA) for clustered regularly interspaced short…
Processes batch analysis of CRISPR edits using Sanger data. ICE can quantify…
Immune system analysis
Extracts glycan determinants from a list of glycan structures. EpitopeXtractor…
Provides a means to model T cell receptors (TCRs) structures from sequence.…
Consists of an open-source deep learning model. MHCSeqNet is a program that can…
Gene expression array analysis
Recognizes spatiotemporal relationships in the human brain. brainImageR offers…
Handles enrichment heatmaps. EnrichedHeatmap is an R package able to gather…
Enables adaptive correlation and covariance matrix shrinkage. CorShrink is a…