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BNNPT Team - Statistical genetics.
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Statistical genetics.
Fudan University • Shanghai • China

Skills and expertise

Fields of interest
  • WGS analysis
  • WES analysis
  • aCGH data analysis
  • Chinese
  • English
Programming languages
  • R




BNNPT / Bagging Nearest-Neighbor Prediction Test

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Detects independence between two random variables especially in non-linear situations. BNNPT is based on a permutation test of the square error (SE) of bagging nearest neighbor estimator. It is able…

Fields of interest

WGS analysis
Allows users to perform reconstruction of phylogenetic trees and ancestral…
Provides a read alignment software for whole genome sequencing (WGS). CS-BWAMEM…
Provides inference of gene regulations using eQTLs as causal anchors by…
WES analysis
Applies an information theoretic approach for effective feature mining and…
Provides a set of tools to calculate the full posterior distribution of human…
Allows users to handle sequencing data with unique molecular identifiers…
aCGH data analysis
Combines several steps for a high-quality probe and primer design for a variety…
Finds cancer subtypes. Scluster is based on an adaptive sparse reduced-rank…
Analyzes next-generation sequencing (NGS) from experiments using unique…