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BNNPT Team - Statistical genetics.
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BNNPT Team

Statistical genetics.
Fudan University • Shanghai • China

Skills and expertise

Fields of interest
  • WGS analysis
  • WES analysis
  • aCGH data analysis
Languages
  • Chinese
  • English
Programming languages
  • R

TOOLS MAINTAINED

BNNPT

Desktop

BNNPT / Bagging Nearest-Neighbor Prediction Test

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Detects independence between two random variables especially in non-linear situations. BNNPT is based on a permutation test of the square error (SE) of bagging nearest neighbor estimator. It is able…

Fields of interest

WGS analysis
Displays interactive mining of complex neuroimaging genomics data. Genome…
Allows copy number variation (CNV) detection. iCNV can be applied in whole…
Annotates and filtrates variant files. VarAFT allows the comparison of several…
WES analysis
Allows copy number variation (CNV) detection. iCNV can be applied in whole…
Annotates and filtrates variant files. VarAFT allows the comparison of several…
Analyzes structural variants (SVs) and allele-specific copy numbers of genomic…
aCGH data analysis
Consists of a Bayesian, unsupervised, integrative clustering model for…
Combines several steps for a high-quality probe and primer design for a variety…
Analyzes next-generation sequencing (NGS) from experiments using unique…