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nasim Bararpour - phd project
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nasim Bararpour

phd project
Centre Universitaire Romand • Switzerland

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • ChIP-seq analysis
  • MS-based untargeted metabolomics
Languages
  • English

Fields of interest

RNA-seq analysis
Predicts protein-coding potential on transcripts. mRNN is capable of learning…
Assists users in pre-processing of read data. BLR is a library preparation…
Provides a method for phylogenetic reconstruction SAMedian calculates the…
ChIP-seq analysis
Predicts functions of no-knowledge proteins, particularly for those in the…
Furnishes a method for detecting novel sequence patterns in the chromatin…
Compresses coordinate sorted aligned SAM, BAM or CRAM files. Crumble is a…
MS-based untargeted metabolomics
Focuses on solving the target control problem. This method is based on an…
Assesses the relationships between metabolites in an untargeted metabolomics…
Assists users for the enumeration of flux top (FTs). FTA is a mathematical…