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Basavaraj Vastrad - bioinformician
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Basavaraj Vastrad

Soniya Education Trust's College of Pharmacy • India

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • Gene expression array analysis
  • Protein interaction analysis
  • English
Programming languages
  • R

Fields of interest

RNA-seq analysis
Allows users to determine logistic regression bio-signatures. PReMS is a…
Predicts missing links in any given bipartite network. Netpredictor provides…
Allows users to distinguish human and mouse reads in High-Throughput Sequencing…
Gene expression array analysis
Analyzes RNA-seq count data. dNBFA is built on a Bayesian covariate-dependent…
Normalizes measurement of long gene expression (LGE) within RNA-seq and…
Discovers low-rank biclusters within a large data-matrix. This method can be…
Protein interaction analysis
Predicts cancer-specific synthetic lethal (SL) interactions of any given…
Permits to study the dynamical features of gene regulatory circuits without the…
Facilitates phylostratigraphic analysis. phylostratr automates sequence…