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Bjørn Øst Hansen - Stuff on networks
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Bjørn Øst Hansen

Stuff on networks
Universitätsmedizin Göttingen • Göttingen • Germany

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • Gene expression array analysis
  • Protein interaction analysis
Languages
  • English
  • German
Programming languages
  • Perl
  • Python
  • R

Fields of interest

RNA-seq analysis
Maps bisulfite-treated short DNA reads to a reference genome. BisPin supports…
Performs RNA-seq quantification using an iterative genome-mapping procedure.…
Assists users in evaluating methods, particularly some data-driven methods or…
Gene expression array analysis
Searches specific gene expression pattern from time-series gene expression data…
Predicts de novo profile generation based on sequence context. SPBuild…
Allows clustering of large-scale networks. HipMCL is a distributed-memory…
Protein interaction analysis
Computes small molecules’ torsional potential energies. H-TEQ can be used for…
Predicts potential microbe-disease associations using a graph-regularized…
Permits to study the dynamical features of gene regulatory circuits without the…