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Bouchra Siralaine - Bioinformatician
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Bouchra Siralaine

Bioinformatician

Skills and expertise

Fields of interest
  • WGS analysis
  • De novo sequencing analysis
  • RNA-seq analysis
Languages
  • English
Programming languages
  • MATLAB
  • Python
  • R

Fields of interest

WGS analysis
Enables computation of kinship from the founder inbreeding coefficients. PedKin…
Authorizes users to perform low-frequency variant calling. AIRVF is a…
Consists of a multiple sequence alignment (MSA) tool based on T-Coffee (TC) to…
De novo sequencing analysis
Enables gene-by-gene (GbG) analyses including building and validating novel…
Aligns raw reads directly against redundant databases. KMA is an alignment…
Evolves phenotypic models of cellular processes. phievo is an evolutionary…
RNA-seq analysis
Performs detection of RNA-seq differential expression (DE). RoMA is a DE…
Performs a structural annotation of protein-coding genes. TGFam-Finder…
Improves comparability of DNA microarray data and RNA-seq datasets. FSQN…