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Braedan McCluskey - Zebrafish Genome and pigment pattern evolution
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Open to new opportunities

Braedan McCluskey

Zebrafish Genome and pigment pattern evolution
University of Virginia • Charlottesville • United States of America

Skills and expertise

Fields of interest
  • WGS analysis
  • De novo sequencing analysis
  • RNA-seq analysis
Languages
  • English
Programming languages
  • R
  • Shell (Bash)

Fields of interest

WGS analysis
Permits users to cluster and visualize samples based on DNA mismatch patterns.…
Allows users to measure polygenic risk scores (PRS). PRSoS provides enhanced…
Evaluates rare short tandem repeat (STR) expansions from whole genome…
De novo sequencing analysis
Employs gene expression heterogeneity to identify genes relating to biological…
Handles arbitrarily large multi-sampled files to produces mutation spectra…
Searches imperfection-tolerant symmetric motifs at genome wide scale. NeSSie…
RNA-seq analysis
Allows users to perform clustering analysis. NNC is a method based on k-means…
Allows to compress DNA sequences, quality scores and read identifiers. FaStore…
Uses existing tools from the Galaxy ToolShed, as well as providing additional…