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Perrine Brianchon - Data Librarian
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Perrine Brianchon

Data Librarian
OmicX • Rouen • France

Skills and expertise

Fields of interest
  • Genome edition
  • RNA-seq analysis
  • Metagenomic sequencing analysis
Languages
  • English
  • French
  • Spanish
Programming languages
  • Other

Fields of interest

Genome edition
Processes batch analysis of CRISPR edits using Sanger data. ICE can quantify…
Constructs optimal gRNAs for the CRISPR-Cpf1 system. CRISPR-DT can take into…
Arranges single-nucleotide and amino acid variants genome-wide and measures…
RNA-seq analysis
Allows users to optimize a scoring function for pairwise-profile alignment…
Assists users to identify DNA methylation in distal regions with a causal…
Models data to maintain realistic patterns of variation and correlation. FANGS…
Metagenomic sequencing analysis
Offers a platform to visualize multiple datasets, focusing on low biomass…
Rectifies errors in long-read sequences. FMLRC employs the FM-index to…
Enhances sequencing depth in low coverage areas with CIGAR string correction.…