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Sebastien Carrere - Bioinformatics
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Sebastien Carrere

Bioinformatics
French National Institute for Agricultural Research • Paris • France

Skills and expertise

Fields of interest
  • WGS analysis
  • De novo sequencing analysis
  • RNA-seq analysis
Languages
  • English
  • French
Programming languages
  • Javascript
  • Perl
  • Shell (Bash)

Bioinformatics projects

TOOLS MAINTAINED

Family-Companion

Web

Family-Companion

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Offers a platform for computing, investigating and sharing of homology groups. Family Companion allows the following features (i) homology cluster computation and automatic analyses, including…
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myGenomeBrowser

Web

myGenomeBrowser

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Provides biologists with a way to build, query and share their genome browsers. myGenomeBrowser is a web-based designed to give users more autonomy while simplifying and minimizing intervention from…

Fields of interest

WGS analysis
Compresses genome sequencing data. BdBG dispatches similar reads into the same…
Assists users with key gene identification in immune diseases. Gene Ranke is an…
Performs approximate Bayesian computation (ABC) model choice and parameter…
De novo sequencing analysis
Compresses genome sequencing data. BdBG dispatches similar reads into the same…
Assists users with key gene identification in immune diseases. Gene Ranke is an…
Enables the discovery, ranking, and clustering of colinear syntenic blocks…
RNA-seq analysis
Compresses genome sequencing data. BdBG dispatches similar reads into the same…
Aims to infer causal graphs. MRPC is a machine learning algorithm that…
Identifies variants and assigns lineage from Mycobacterium tuberculosis complex…