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Chema Martín - Postdoctoral researcher
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Chema Martín

Postdoctoral researcher
University of Bergen • Bergen • Norway

Skills and expertise

Fields of interest
  • WGS analysis
  • RNA-seq analysis
  • BS-seq analysis
Languages
  • English
Programming languages
  • Shell (Bash)

Fields of interest

WGS analysis
Incorporates tools and workflows for the analysis of environmental DNA (eDNA)…
Provides a tool to select the band width according to the read’s error rates.…
Filters out single nucleotide polymorphism (SNP) events caused by recombination…
RNA-seq analysis
Assists users in processing and similarity searching of next-generation…
Evaluates RNA-seq alignment results. RNAseqEval is a package that can be used…
Identifies combined sequence and structure motifs. SMARTIV associates the RNA…
BS-seq analysis
Provides a deep neural network base caller for nanopore sequencing. Chiron…
Supplies a protein homology search method alternative to BLAST. TOPAZ is a…
Maps ethyl methanesulfonate (EMS)-induced mutations in forward genetic screens…