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Chhaya Singh - Exploring Genome
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Chhaya Singh

Exploring Genome
Council for Scientific and Industrial Research • Pretoria • South Africa

Skills and expertise

Fields of interest
  • Drug design
  • De novo sequencing analysis
  • Protein interaction analysis
Languages
  • English
Programming languages
  • Java
  • MATLAB

Fields of interest

Drug design
Provides an atom pair contribution (APC) model. APC Method can predict the…
Builds chemical and biological annotations for Tox21 assay data. Tox21 Enricher…
Processes standard binding free-energy calculations. BFEE is a plug-in of the…
De novo sequencing analysis
Produces maximum-likelihood phylogenetic trees and their associated distance…
Classifies protein sequence and identifies remote protein homology via…
Identifies insertions and deletions (indels) from DNA-seq or RNA-seq data.…
Protein interaction analysis
Investigates motifs of network structure, nodes and links of any type of…
Allows atomic-level, sequence-order independent comparison of ligand molecule…
Classifies the position preferences of cis-regulatory elements (CRE) via a…