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Chhaya Singh - Exploring Genome
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Chhaya Singh

Exploring Genome
Council for Scientific and Industrial Research • Pretoria • South Africa

Skills and expertise

Fields of interest
  • Drug design
  • De novo sequencing analysis
  • Protein interaction analysis
Languages
  • English
Programming languages
  • Java
  • MATLAB

Fields of interest

Drug design
Assists users with the prediction of novel drug response of cancer cell lines.…
Aims to optimize lead compounds in drug design using scaffold hopping. ADMETopt…
Models proteome dynamics using gene expression data. DynProt estimates genome…
De novo sequencing analysis
Assists in small-variant detection. Pisces is designed to be used on germline…
Represents all sequence reads and their similarity relationships using a graph…
Discovers large indels using optical maps (OM) reads with weak signal. OMIndel…
Protein interaction analysis
Provides an application for robust integration of heterogeneous data with…
Serves to predict future disease-gene-chemical associations. Multimodal Network…
Deduces gene regulations by exploiting time-series gene expression data.…