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Christian Gauthier

Johns Hopkins University • Baltimore • United States of America

Skills and expertise

Fields of interest
  • Genome edition
  • WGS analysis
  • Metagenomic sequencing analysis
  • English
Programming languages
  • Python
  • R

Fields of interest

Genome edition
Identifies, quantifies and visualizes genuine genome editing events form CRIPR…
Assesses deep-sequencing data from clustered regularly interspaced short…
Processes batch analysis of CRISPR edits using Sanger data. ICE can quantify…
WGS analysis
Rectifies errors in long-read sequences. FMLRC employs the FM-index to…
Assists users in association mapping of pair-wise traits. iMAP is a mixture…
Clusters variants into clones. QuantumClone applies an expectation-maximization…
Metagenomic sequencing analysis
Breaks the annotated genomes of a large number of strain into genes and further…
Identifies and quantifies the abundance of viruses in metagenomics data.…
Combines structural variation (SV) calls from different algorithms to reduce…