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ChunfangZheng - Bioinfomatic programmer
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ChunfangZheng

Bioinfomatic programmer
Government of Canada • Agriculture and Agriculture-Food Canada • Ottawa • Canada

Skills and expertise

Fields of interest
  • WGS analysis
  • RNA-seq analysis
  • Metagenomic sequencing analysis
Languages
  • English
Programming languages
  • Java

Fields of interest

WGS analysis
Assists in small-variant detection. Pisces is designed to be used on germline…
Allows the joint analysis of individual-level data and summary statistics. LEP…
Allows annotation and prediction of cis-expression quantitative trait locus…
RNA-seq analysis
Identifies protein-lncRNA interactions. PLIPCOM is constructed from three…
Discovers large indels using optical maps (OM) reads with weak signal. OMIndel…
Identifies genetic variants that overlap with genes coding for lincRNA or miRNA…
Metagenomic sequencing analysis
Simulates reads from evolving microbial populations. MetaSMC supports all…
Serves as a function prediction pipeline to detect protein-level annotations to…
Assists users for visualizing ancestry data. AncestryView first proceeds by…