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Chunhua Yan - Bioinformatics
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Chunhua Yan

Bioinformatics
National Institutes of Health • National Cancer Institute • Rockville • United States of America

Skills and expertise

Fields of interest
  • De novo sequencing analysis
  • RNA-seq analysis
  • Protein interaction analysis
Languages
  • English
Programming languages
  • R

Fields of interest

De novo sequencing analysis
Permits exome, whole-genome, and targeted sequencing analyses. Mosdepth is a…
Calculates the mutation distance between two strings of the length…
Serves for Illumina short read sequencing data. PriLive allows users to remove…
RNA-seq analysis
Performs RNA-seq quantification using an iterative genome-mapping procedure.…
Permits users to classify reads into barcode bins using the raw read signal.…
Filters spurious variants caused by mouse reads in patient-derived xenografts…
Protein interaction analysis
Allows pathway-based analysis and visualization. PyPathway includes four…
Provides a queryable global characterization of dynamics over large regions of…
Aligns phenotypic abnormality defining human phenotype ontology (HPO) terms…