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Claudio Ametrano - bioinformatics, environmental biology, fungi, biodiversity, evolution
Open to new opportunities
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Open to new opportunities

Claudio Ametrano

bioinformatics, environmental biology, fungi, biodiversity, evolution
University of Trieste • Trieste • Italy

Skills and expertise

Fields of interest
  • De novo sequencing analysis
  • Metagenomic sequencing analysis
  • Gene expression array analysis
Languages
  • English
Programming languages
  • Python

Fields of interest

De novo sequencing analysis
Predicts cell-type specificity of a transcription factors (TFs) binding site…
An indexing scheme to support sequence-based querying of terabyte-scale…
Provides a read alignment software for whole genome sequencing (WGS). CS-BWAMEM…
Metagenomic sequencing analysis
Identifies microbial pathogens from metagenomic next-generation sequencing…
Enhances sequencing depth in low coverage areas with CIGAR string correction.…
Allows users to test multiple gene sets on a tree-transformed gene ontology…
Gene expression array analysis
Calculates average amino-acid identity (AAI) between a query proteome and all…
Allows to rank, filter and explore cancer genomics data (genes, cell lines and…
Classifies protein sequence and identifies remote protein homology via…