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Constantina Theofanopoulou - Phd in Neuroscience
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Constantina Theofanopoulou

Phd in Neuroscience
University of Barcelona • Barcelona • Spain

Skills and expertise

Fields of interest
  • ChIP-seq analysis
  • Gene expression array analysis
  • Protein interaction analysis
Languages
  • English

Fields of interest

ChIP-seq analysis
Implements an indexing data structure for compacted de Bruijn graph (dBG) and…
Offers a toolbox dedicated to the valuation of gene regulatory networks (GRNs).…
Identifies precise transcription factor binding sites (TFBS). DeepSNR is based…
Gene expression array analysis
Handles enrichment heatmaps. EnrichedHeatmap is an R package able to gather…
Allows users to compare genomic structures and annotations across multiple…
Normalizes measurement of long gene expression (LGE) within RNA-seq and…
Protein interaction analysis
Predicts gene regulatory regions from genome sequences. DeepGMAP supplies a…
Discovers different patterns of protein-protein interactions (PPIs) in…
Deconstructs drugs effects of interest into basic components. OLSA is a package…