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DAIKI SHIKATA - Analysis of genes' function
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DAIKI SHIKATA

Analysis of genes' function
Kyoto University • Kyoto • Japan

Skills and expertise

Fields of interest
  • RNA-seq analysis
  • ChIP-seq analysis
  • DNA methylation array analysis
Languages
  • English
  • Japanese
Programming languages
  • C

Fields of interest

RNA-seq analysis
Quantifies miRNA from small RNA-seq. miR-MaGiC minimizes noise associated with…
Allows users to compare genomic structures and annotations across multiple…
Performs tree reconstruction based on the supermatrix paradigm. OneTwoTree is a…
ChIP-seq analysis
Simplifies downstream utilization of high-throughput sequencing (HTS) data.…
Enables network discovery from perturbed expression data. This approach…
Examines cis-regulatory modules (CRM) and cis-regulatory elements (CRE). EDCC…
DNA methylation array analysis
Enables to build custom genome browsers. GIVe is a programming library allowing…
Contains a library to process over- and under-representation of certain gene…
Performs secure analyses and visualization of users’ private functional…