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DJEBBAR SOUFIANE - internship in metagenomic
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internship in metagenomic

Skills and expertise

Fields of interest
  • BS-seq analysis
  • Metagenomic sequencing analysis
  • Gene expression array analysis
  • Arabic
  • English
  • French
Programming languages
  • C++
  • Python
  • R

Fields of interest

BS-seq analysis
Allows users to conduct large-scale comparisons of their results with thousands…
Examines epigenomic and transcriptomic next generation sequencing (NGS) data.…
Recognizes differentially methylated regions between the conditions in CG and…
Metagenomic sequencing analysis
Categorizes organisms of interest into species by exploiting genomic…
Serves as a fully automatic analysis of protein family conservation within a…
Identifies reads originating from marker, and assembles nearly full length 16S…
Gene expression array analysis
Allows users to perform clustering analysis. NNC is a method based on k-means…
Permits cluster identification using ensemble clustering. diceR assists users…
Allows clustering of large-scale networks. HipMCL is a distributed-memory…