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Daniela Sosa - Evolution biology
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Daniela Sosa

Evolution biology
Universidad Autónoma Metropolitana • Mexico City • Mexico

Skills and expertise

Fields of interest
  • BS-seq analysis
  • DNA methylation array analysis
  • Protein interaction analysis
  • Spanish
Programming languages
  • Python

Fields of interest

BS-seq analysis
Provides a standard for bisulfite sequencing data related manipulation.…
Annotates and filtrates variant files. VarAFT allows the comparison of several…
Predicts de novo profile generation based on sequence context. SPBuild…
DNA methylation array analysis
Removes the positional effects and batch effects in data preprocessing.…
Contains a library to process over- and under-representation of certain gene…
Stores projects and creates a directory of analysed results and parameter.…
Protein interaction analysis
Supplies an implementation of Regularized LS-TreeBoost & LAD-TreeBoost…
Builds genome-minimized strains. MinGenome excludes metabolic and regulatory…
Permits network reconstruction and quantification of networks in multiple cell…