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David Goudenège - Clinical bioinformatic
Open to new opportunities
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Open to new opportunities

David Goudenège

Clinical bioinformatic
Centre Hospitalier Universitaire de Angers • Angers • France

Skills and expertise

Fields of interest
  • WGS analysis
  • WES analysis
  • aCGH data analysis
Languages
  • French
Programming languages
  • Python

Fields of interest

WGS analysis
Performs cancer driver gene prediction. LOTUS is a machine learning-based…
Classifies protein sequence and identifies remote protein homology via…
Includes implementations of the autopolyploid (diseq), allopolyploid (alloSNP),…
WES analysis
Performs structural variants (SVs) calling from low coverage long-read…
Identifies somatic single nucleotide variants (SNVs). S22S detects somatic SNV…
Assists users in counting small k-mer frequencies in nucleotide sequences.…
aCGH data analysis
Analyzes next-generation sequencing (NGS) from experiments using unique…
Finds cancer subtypes. Scluster is based on an adaptive sparse reduced-rank…
Enables spatial mapping of RNA-seq transcript data onto high resolution tissue…