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Delphine Labourdette - NGS analysis
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Delphine Labourdette

NGS analysis
University of Toulouse • Institut National des Sciences Appliquées de Toulouse • Toulouse • France

Skills and expertise

Fields of interest
  • De novo sequencing analysis
  • RNA-seq analysis
  • Gene expression array analysis
Languages
  • English
  • French
  • Spanish
Programming languages
  • Python
  • R

Fields of interest

De novo sequencing analysis
Provides assistance for predicting multi locus sequence type (MLST) of genomes.…
Permits visualization of pan-chromosome data. PanACEA leverages bacterial…
Identifies genomic islands (GIs) in a genome by consensus clustering on…
RNA-seq analysis
Provides a neighbor protein structure retrieval method. ContactLib scans…
Detects prognostic biomarkers and gene modules. G2Vec is a network-based deep…
Allows generation and evaluation of phylogenetic trees. UBCG is based on the…
Gene expression array analysis
Identifies optimal number of clusters while partitioning data. Shrinkage…
Reproduces Gaussian clusters. Clusterlab is a customizable package, able to…
Enables spatial mapping of RNA-seq transcript data onto high resolution tissue…