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Derek Siebert - software developer
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Derek Siebert

software developer
University of Iowa • Iowa City • United States of America

Skills and expertise

Fields of interest
  • Genome edition
  • Synthetic biology
  • Gene expression array analysis
Languages
  • English
Programming languages
  • Javascript

Fields of interest

Genome edition
Constructs optimal gRNAs for the CRISPR-Cpf1 system. CRISPR-DT can take into…
Performs analysis, visualization and comparison of sequencing data from genome…
Creates single-guide RNA (sgRNA) for clustered regularly interspaced short…
Synthetic biology
Allows modular assembly of Golden Gate-compatible cloning broad-host range…
Deduces the "lab-of-origin" of DNA sequence datasets. predict-lab-origin is an…
Aims to assemble multiple DNA fragments in a single reaction using a…
Gene expression array analysis
Permits users to perform co-expression analysis. CNNC is an application that…
Analyzes RNA-seq count data. dNBFA is built on a Bayesian covariate-dependent…
Provides an online platform for collecting, managing, analyzing, visualizing…