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Didier Debroas - Metagenomics
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Didier Debroas

Metagenomics
University of Clermont Auvergne • Clermont-Ferrand • France

Skills and expertise

Fields of interest
  • De novo sequencing analysis
  • RNA-seq analysis
  • Metagenomic sequencing analysis
Languages
  • French
Programming languages
  • Perl

Fields of interest

De novo sequencing analysis
Minimizes the gap open and gap extension penalties depending on the length of…
Evaluates rare short tandem repeat (STR) expansions from whole genome…
Forecasts disease candidate genes. The approach is composed of a learning and a…
RNA-seq analysis
Performs computation of distance precision matrix and regularized distance…
Provides a collection of tools designed to work on the BARM database. BARM…
Detects and assists in designing potential target sites within human genome.…
Metagenomic sequencing analysis
Provides a method for inferring transmission events. BadTrIP models evolution…
Assists users in building, editing, simulating, and interpreting macromolecular…
Quantifies and displays all the clusters formed by the genes, given a list of…