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Emily Knott - Evolutionary biologist
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Emily Knott

Evolutionary biologist
University of Jyväskylä • Jyväskylä • Finland

Skills and expertise

Fields of interest
  • De novo sequencing analysis
  • RNA-seq analysis
  • Gene expression array analysis
Languages
  • English
Programming languages
  • R

Fields of interest

De novo sequencing analysis
Processes raw reads to count tables for RNA-seq data using Unique Molecular…
Allows users to identify branchpoints throughout the human genome thanks to…
Reconstructs tumor’s timelines. Palimpsest gathers computational methods…
RNA-seq analysis
Consists of a genomic context explorer. GeneSpy is a program that aims to…
Analyzes RNA-seq count data. dNBFA is built on a Bayesian covariate-dependent…
Automatically combines transcriptomes from difference sources, such as assembly…
Gene expression array analysis
Carries out gene expression correlation analysis. GECO is a web server that…
Allows to detect gene families in transcriptomes under strong selection. FUSTr…
Stores projects and creates a directory of analysed results and parameter.…